2016, Cilt 46, Sayı 1, Sayfa(lar) 008-017 |
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Determination of Iron-Transport-Related Gene Expression Levels in Acquired Iron Stress-Resistant Saccharomyces cerevisiae Yeast Using Real-Time, Quantitative Polymerase Chain Reaction (q rt-PCR) |
Berrak Gülçin BALABAN1,2, Ülkü YILMAZ1,2, Ceren ALKIM1,2, Zeynep Petek ÇAKAR1,2 |
1İstanbul Teknik Üniversitesi, Fen-Edebiyat Fakültesi, Moleküler Biyoloji ve Genetik Bölümü, İstanbul 2İstanbul Teknik Üniversitesi, Dr. Orhan Öcalgiray Moleküler Biyoloji-Biyoteknoloji ve Genetik Araştırmalar Merkezi, İstanbul |
Keywords: Iron resistance, q rt-PCR, Saccharomyces cerevisiae |
Objective: The aim of this study was to investigate experimentally
the roles of iron transport-related genes involved in iron-resistance
mechanism, using the iron-resistant yeast Saccharomyces
cerevisiae as a model organism.
Materials and Methods: S. cerevisiae M8FE strain previously
made resistant to iron ion in our previous studies was used with S.
cerevisiae CEN.PK113-7D reference strain. The expression levels
of AFT1, FET3, FET4, COT1, CCC1 and ZRC1 genes known to be
related to iron ion transport were comparatively determined under
control, low (1 mM) and high (15 mM) iron-stress conditions,
using real-time, quantitative polymerase chain reaction (q rt-PCR)
method.
Results: Among the investigated genes, FET3 had the highest
variation in expression levels. In the presence of 1 mM iron-stress,
FET3 expression increased in iron stress-resistant M8FE strain up
to about 16-fold of the reference strain under control conditions
whereas it increased to about three-fold at high (15 mM) level of
iron-stress. Generally significant increases were also observed in
CCC1 and COT1 gene expression levels. AFT1 expression levels
decreased under high iron-stress while those of FET4 gene
increased under low iron stress. ZRC1 expression level increased
up to three-fold of the reference strain under control conditions in
M8FE grown only under high (15 mM) iron-stress. High ironstress
resulted in a significant increase in CCC1 and COT1 gene
expression levels in M8FE, similar to ZRC1.
Conclusions: Gene expression analysis results showed that FET3
and AFT1 genes are related to iron resistance and environmental
iron ion levels. Gene expression level data imply that CCC1,
responsible for vacuolar iron-transport, ZRC1, for vacuolar zinctransport,
and COT1, for vacuolar cobalt transport which all may
be associated with vacuolar iron transport under high levels of
iron stress, and iron resistance.
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